Invoicing and associating it with Banking transactions

Invoicing and associating it with Banking transactions

I am setting up Zoho Books. Here are key details of my setup
- Base Currency : INR
- Invoice Currency: USD
- Banking : ICICI Corp Bank Attached

I created a few past invoices, and was trying to associate them with banking transactions via setting category of transaction as "Customer Payment". For an example scenario, if total invoiced amount is 100$, and I got 4500 INR in my bank account after bank charges(3 USD) and remittance charges(100 Rs). How should I connect them all to represent the transaction correctly in zoho ?