When we try and match Ebay/marketplace sales we are unable to do it via the match transaction feature as the amount we receive has already reduced by the Paypal fees and therefore we cannot match it with the invoice that is auto generated via an automation in Zoho Invoice.

In our old accounting tool PayPal showed the correct amount and then another line with the fee separate which we could auto classify as "Banking charges".

How do we work our way around this to ensure our accounting is correct?

Should we also change the automation script to mark the transaction as PAID automatically and then remove PayPal from our feed and manually add fees in every month as a manual bank charge?

Look forwards to your ideas and recommendations.